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Updated 12 months ago
Indexed 3 days ago

The genome of cowpea (Vigna unguiculata L. Walp.): Insertion and Deletion Variations

Insertion (INS) and deletion (DEL) variations identified by BreakDancer (Chen et al. 2009) in a set of 36 diverse cowpea accessions. Columns 2 -4 and 5-7 specify the coordinates of the two breakpoints. The orientation is a string that records the number of reads mapped to the (+) or (-) strand in the anchoring regions. The confidence score associated with the prediction is also shown.

Querying over HTTP

Splitgraph serves as an HTTP API that lets you run SQL queries directly on this data to power Web applications. For example:

curl \
    -H "Content-Type: application/json" \
{"sql": "
    SELECT *
    FROM \"usaid-gov/the-genome-of-cowpea-vigna-unguiculata-l-walp-2rm6-zbwh\".\"the_genome_of_cowpea_vigna_unguiculata_l_walp\"
    LIMIT 100 

See the Splitgraph documentation for more information.

  • the_genome_of_cowpea_vigna_unguiculata_l_walp
Upstream Metadata