The genome of cowpea (Vigna unguiculata L. Walp.): SNP Positions

Position of SNPs previously described (Muñoz-Amatriaín et al. 2017) from alignment of discovered by WGS sequencing of 36 accessions, 5 in the cowpea reference genome sequence. Information on SNPs included in the previous Illumina Cowpea iSelect Consortium Array genotyping platforms is also shown, including the alleles when exported from the Genome Studio software as Forward Strand.

Querying over HTTP

Splitgraph serves as an HTTP API that lets you run SQL queries directly on this data to power Web applications. For example:

curl https://data.splitgraph.com/sql/query/ddn \
    -H "Content-Type: application/json" \
    -d@-<<EOF
{"sql": "
    SELECT *
    FROM \"usaid-gov/the-genome-of-cowpea-vigna-unguiculata-l-walp-snp-44cx-8wbh\".\"the_genome_of_cowpea_vigna_unguiculata_l_walp_snp\"
    LIMIT 100 
"}
EOF

See the Splitgraph documentation for more information.